EnhancerDB
  1. Home
  2. SNP
  3. rs12124860[chr1:9627103]
Enhancers that have rs12124860[chr1:9627103]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9595905 9627275 enh49
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12124860[chr1:9627103]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9627085 9627106 IRF1 JASPAR yes 26663130
chr1 9627086 9627107 IRF1 JASPAR yes 26663132
chr1 9627092 9627113 IRF1 JASPAR yes 26663134
chr1 9627095 9627116 ZNF263 JASPAR yes 26663135
chr1 9627096 9627111 PRDM1 JASPAR yes 26663136
chr1 9627096 9627117 IRF1 JASPAR yes 26663137
chr1 9627100 9627115 PRDM1 JASPAR yes 26663138
Genes associated with rs12124860[chr1:9627103], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More