EnhancerDB
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  3. rs12125690[chr1:222010866]
Enhancers that have rs12125690[chr1:222010866]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 221995465 222021667 enh12697
Liver Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12125690[chr1:222010866]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 222008919 222013530 AR GTRD no Prostate (PC-3) 21382826
chr1 222008919 222013530 AR GTRD no Prostate (PC-3) 107872234
chr1 222010157 222010903 ZNF143 GTRD no Epithelial (MCF-7) 21382856
chr1 222010862 222010874 FOXC2 JASPAR yes 35573627
chr1 222010863 222010874 FOXC1 JASPAR yes 35573628
chr1 222010864 222010868 YY1 TRANSFAC yes 35573629
Genes associated with rs12125690[chr1:222010866], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More