EnhancerDB
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  3. rs12126789[chr1:232704831]
Enhancers that have rs12126789[chr1:232704831]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232703025 232718279 enh47311
Prostate (PC-3) Epithelial (MCF-7) Brain (SK-N-MC) Blood (T-cell) Esophagus Lung Blood (OCI-LY7) Stomach Muscle (A673) Peripheral Blood (MM.1S) Adrenal Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs12126789[chr1:232704831]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232704198 232705270 ZNF143 GTRD no Epithelial (MCF-7) 21392236
chr1 232704214 232708024 AR GTRD no Prostate (PC-3) 21392237
chr1 232704510 232705370 ZNF143 GTRD no Epithelial (MCF-7) 21392238
chr1 232704519 232705393 ZNF143 GTRD no Epithelial (MCF-7) 21392239
chr1 232704533 232705455 ZNF143 GTRD no Epithelial (MCF-7) 21392240
chr1 232704600 232705256 ZNF143 GTRD no Epithelial (MCF-7) 21392241
chr1 232704602 232705247 ZNF143 GTRD no Epithelial (MCF-7) 21392242
chr1 232704614 232705313 ZNF143 GTRD no Epithelial (MCF-7) 21392243
chr1 232704616 232705325 ZNF143 GTRD no Epithelial (MCF-7) 21392244
chr1 232704634 232705176 ZNF143 GTRD no Epithelial (MCF-7) 21392245
chr1 232704687 232705276 ZNF143 GTRD no Epithelial (MCF-7) 21392246
chr1 232704739 232705259 ZNF143 GTRD no Epithelial (MCF-7) 21392247
chr1 232704740 232705251 ZNF143 GTRD no Epithelial (MCF-7) 21392248
chr1 232704748 232705110 ZNF143 GTRD no Epithelial (MCF-7) 21392249
chr1 232704749 232705285 ZNF143 GTRD no Epithelial (MCF-7) 21392250
chr1 232704769 232705137 ZNF143 GTRD no Epithelial (MCF-7) 21392251
chr1 232704774 232705125 ZNF143 GTRD no Epithelial (MCF-7) 21392252
chr1 232704800 232705194 ZNF143 GTRD no Epithelial (MCF-7) 21392253
Genes associated with rs12126789[chr1:232704831], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 232533711 232697304 - SIPA1L2 ENSG00000116991.6 232697304 7527 Uterus 0.26243 1955