EnhancerDB
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  3. rs12127749[chr1:52009908]
Enhancers that have rs12127749[chr1:52009908]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 51998705 52011795 enh359
Prostate (PC-3) Cervix (HeLa-S3) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs12127749[chr1:52009908]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52009897 52009913 T JASPAR yes 28848229
chr1 52009901 52009909 TBX5 JASPAR yes 28848230
chr1 52009901 52009910 ZEB1 JASPAR yes 28848231
chr1 52009901 52009914 ZBTB18 JASPAR yes 28848232
chr1 52009901 52009916 SCRT1 JASPAR yes 28848233
chr1 52009902 52009912 FIGLA JASPAR yes 28848234
chr1 52009902 52009912 ID4 JASPAR yes 28848235
chr1 52009902 52009912 TCF3 JASPAR yes 28848236
chr1 52009902 52009912 TCF4 JASPAR yes 28848237
chr1 52009903 52009912 SNAI2 JASPAR yes 28848238
chr1 52009904 52009909 USF2 TRANSFAC yes 28848239
Genes associated with rs12127749[chr1:52009908], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More