EnhancerDB
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  3. rs12128456[chr1:180895678]
Enhancers that have rs12128456[chr1:180895678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180889388 180897070 enh12427
Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
chr1 180895607 180895967 vista4085
VISTA
Transcript factors that have rs12128456[chr1:180895678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180895258 180896125 ZNF274 GTRD no Liver (HepG2) 21354176
chr1 180895258 180896125 ZNF274 GTRD no Liver (HepG2) 107848028
chr1 180895563 180895919 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21354177
chr1 180895563 180895919 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107848029
chr1 180895640 180896096 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107848030
chr1 180895647 180896167 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21354178
chr1 180895647 180896167 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107848031
chr1 180895672 180895682 NFATC3 JASPAR yes 33542390
chr1 180895672 180895682 NFATC3 JASPAR yes 118407354
chr1 180895672 180896008 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107848032
chr1 180895674 180895681 NFATC2 JASPAR yes 33542391
chr1 180895674 180895681 NFATC2 JASPAR yes 118407355
chr1 180895676 180895688 YY1 JASPAR yes 33542392
chr1 180895676 180895688 YY1 JASPAR yes 118407356
Genes associated with rs12128456[chr1:180895678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More