EnhancerDB
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  3. rs12130826[chr1:16442477]
Enhancers that have rs12130826[chr1:16442477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16434153 16452566 enh26556
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs12130826[chr1:16442477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16439954 16443334 ZNF274 GTRD no Blood (GM12878) 107802219
chr1 16442470 16442477 SP1 TRANSFAC yes 27026320
chr1 16442470 16442480 SP1 JASPAR yes 27026321
chr1 16442471 16442479 SP1 TRANSFAC yes 27026322
chr1 16442472 16442477 SP1 TRANSFAC yes 27026323
chr1 16442473 16442478 SP1 TRANSFAC yes 27026324
chr1 16442473 16442479 SP1 TRANSFAC yes 27026325
chr1 16442477 16442487 SP1 JASPAR yes 27026326
Genes associated with rs12130826[chr1:16442477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More