EnhancerDB
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  3. rs12142533[chr1:44237120]
Enhancers that have rs12142533[chr1:44237120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 44221165 44237481 enh300
Skin (Keratinocyte) Liver (HepG2) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Blood (GM12878) Muscle (A673) Thyroid Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12142533[chr1:44237120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 44237110 44237120 SP1 JASPAR yes 28517440
chr1 44237113 44237125 TFAP2A JASPAR yes 28517444
chr1 44237113 44237125 TFAP2B JASPAR yes 28517445
chr1 44237114 44237123 TFAP2A JASPAR yes 28517446
Genes associated with rs12142533[chr1:44237120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More