EnhancerDB
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  3. rs12142576[chr1:206913937]
Enhancers that have rs12142576[chr1:206913937]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206905983 206916695 enh899
Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs12142576[chr1:206913937]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206907082 206914424 ZNF274 GTRD no Blood (GM12878) 107863444
chr1 206907774 206914449 ZNF274 GTRD no Blood (GM12878) 107863447
chr1 206908712 206914290 ZNF274 GTRD no Blood (GM12878) 107863453
chr1 206910563 206914051 ZNF274 GTRD no Cervix (HeLa-S3) 21372689
chr1 206910563 206914051 ZNF274 GTRD no Cervix (HeLa-S3) 107863468
chr1 206911768 206914143 ZNF143 GTRD no Epithelial (MCF-7) 21372711
chr1 206913652 206914303 ZNF143 GTRD no Epithelial (MCF-7) 21372736
chr1 206913920 206913940 TBX19 JASPAR yes 34824293
chr1 206913928 206913939 CEBPA JASPAR yes 34824294
chr1 206913929 206913939 CEBPB JASPAR yes 34824295
chr1 206913929 206913939 CEBPD JASPAR yes 34824296
chr1 206913929 206913939 CEBPE JASPAR yes 34824297
chr1 206913929 206913939 CEBPG JASPAR yes 34824298
chr1 206913929 206913940 CEBPB JASPAR yes 34824299
chr1 206913936 206913949 SMAD2 JASPAR yes 34824300
Genes associated with rs12142576[chr1:206913937], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More