EnhancerDB
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  3. rs12150552[chr17:55745269]
Enhancers that have rs12150552[chr17:55745269]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55736279 55747115 enh4495
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12150552[chr17:55745269]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55745256 55745271 FOXP1 JASPAR yes 54981545
chr17 55745263 55745269 HiNF-A TRANSFAC yes 54981546
chr17 55745265 55745280 ZIC3 JASPAR yes 54981547
chr17 55745265 55745280 ZIC4 JASPAR yes 54981548
chr17 55745266 55745280 ZIC1 JASPAR yes 54981549
Genes associated with rs12150552[chr17:55745269], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More