EnhancerDB
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  3. rs1218547[chr1:154807018]
Enhancers that have rs1218547[chr1:154807018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs1218547[chr1:154807018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154807009 154807019 GBX2 JASPAR yes 32316388
chr1 154807009 154807019 HESX1 JASPAR yes 32316389
chr1 154807009 154807019 LHX2 JASPAR yes 32316390
chr1 154807009 154807019 RAX JASPAR yes 32316391
chr1 154807010 154807018 LHX9 JASPAR yes 32316392
chr1 154807010 154807018 SHOX JASPAR yes 32316393
chr1 154807010 154807019 VENTX JASPAR yes 32316394
chr1 154807011 154807021 PAX3 JASPAR yes 32316395
chr1 154807011 154807021 PAX7 JASPAR yes 32316396
chr1 154807011 154807022 PHOX2A JASPAR yes 32316397
Genes associated with rs1218547[chr1:154807018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More