EnhancerDB
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  3. rs1218562[chr1:154818509]
Enhancers that have rs1218562[chr1:154818509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs1218562[chr1:154818509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154818505 154818520 ZIC3 JASPAR yes 32318066
chr1 154818505 154818520 ZIC4 JASPAR yes 32318067
chr1 154818506 154818520 ZIC1 JASPAR yes 32318068
Genes associated with rs1218562[chr1:154818509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More