EnhancerDB
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  3. rs12198342[chr6:134685200]
Enhancers that have rs12198342[chr6:134685200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 134665022 134705335 enh23620
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Heart
Transcript factors that have rs12198342[chr6:134685200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 134684535 134685202 EP300 UCSC Txn Factor no Conserved 108541711
chr6 134685185 134685200 FOXP1 JASPAR yes 105433643
chr6 134685191 134685204 POU2F2 JASPAR yes 105433644
chr6 134685191 134685205 POU1F1 JASPAR yes 105433645
chr6 134685196 134685210 POU4F1 JASPAR yes 105433646
chr6 134685196 134685212 POU4F2 JASPAR yes 105433647
chr6 134685196 134685212 POU4F3 JASPAR yes 105433648
chr6 134685199 134685203 YY1 TRANSFAC yes 105433649
Genes associated with rs12198342[chr6:134685200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More