EnhancerDB
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  3. rs12206904[chr6:42394035]
Enhancers that have rs12206904[chr6:42394035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42379945 42401115 enh9118
Large Intestine Blood (GM12878) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs12206904[chr6:42394035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42394028 42394040 TAL1 JASPAR yes 101721246
chr6 42394029 42394041 BHLHE23 JASPAR yes 101721247
chr6 42394030 42394040 BHLHE22 JASPAR yes 101721248
chr6 42394030 42394040 NEUROD2 JASPAR yes 101721249
chr6 42394030 42394040 OLIG1 JASPAR yes 101721250
chr6 42394030 42394040 OLIG2 JASPAR yes 101721251
chr6 42394030 42394040 OLIG3 JASPAR yes 101721252
chr6 42394032 42394044 POU2F1 JASPAR yes 101721253
chr6 42394032 42394045 POU3F3 JASPAR yes 101721254
chr6 42394032 42394046 POU1F1 JASPAR yes 101721255
chr6 42394032 42394047 FOXP1 JASPAR yes 101721256
chr6 42394033 42394044 FOXA1 JASPAR yes 101721257
chr6 42394033 42394045 POU3F1 JASPAR yes 101721258
chr6 42394033 42394045 POU3F2 JASPAR yes 101721259
chr6 42394033 42394046 POU2F2 JASPAR yes 101721260
chr6 42394033 42394048 FOXA1 JASPAR yes 101721261
chr6 42394034 42394042 FOXL1 JASPAR yes 101721262
chr6 42394034 42394043 POU3F4 JASPAR yes 101721263
chr6 42394034 42394043 POU5F1B JASPAR yes 101721264
chr6 42394034 42394045 FOXB1 JASPAR yes 101721265
chr6 42394034 42394045 FOXC1 JASPAR yes 101721266
chr6 42394034 42394046 FOXC2 JASPAR yes 101721267
Genes associated with rs12206904[chr6:42394035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More