EnhancerDB
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  3. rs12209901[chr6:17723189]
Enhancers that have rs12209901[chr6:17723189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17712332 17727615 enh23084
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs12209901[chr6:17723189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17723170 17723191 IRF1 JASPAR yes 100397332
chr6 17723174 17723189 FOXP1 JASPAR yes 100397336
chr6 17723182 17723197 HNF1A JASPAR yes 100397337
chr6 17723184 17723196 MEF2B JASPAR yes 100397338
Genes associated with rs12209901[chr6:17723189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More