EnhancerDB
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  3. rs12211656[chr6:39249185]
Enhancers that have rs12211656[chr6:39249185]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 39227705 39251475 enh23217
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Liver Stomach Placenta Thyroid Lung (PC-9) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
chr6 39249172 39249431 vista51856
VISTA
Transcript factors that have rs12211656[chr6:39249185]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 39249176 39249188 GLI2 JASPAR yes 70360257
chr6 39249176 39249188 GLI2 JASPAR yes 101524198
chr6 39249176 39249191 RUNX2 JASPAR yes 70360258
chr6 39249176 39249191 RUNX2 JASPAR yes 101524199
chr6 39249177 39249186 RUNX2 JASPAR yes 70360259
chr6 39249177 39249186 RUNX2 JASPAR yes 101524200
chr6 39249177 39249187 RUNX3 JASPAR yes 70360260
chr6 39249177 39249187 RUNX3 JASPAR yes 101524201
chr6 39249182 39249188 SOX10 JASPAR yes 70360261
chr6 39249182 39249188 SOX10 JASPAR yes 101524202
Genes associated with rs12211656[chr6:39249185], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More