EnhancerDB
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  3. rs12220543[chr10:25180024]
Enhancers that have rs12220543[chr10:25180024]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 25169345 25193458 enh13071
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12220543[chr10:25180024]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 25180007 25180025 SRF JASPAR yes 126101552
chr10 25180024 25180028 H1TF2 TRANSFAC yes 126101562
chr10 25180024 25180028 NFE TRANSFAC yes 126101563
chr10 25180024 25180028 SRF TRANSFAC yes 126101564
Genes associated with rs12220543[chr10:25180024], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More