EnhancerDB
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  3. rs12240089[chr1:31977447]
Enhancers that have rs12240089[chr1:31977447]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31947645 31983179 enh198
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (T-cell) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Thymus Epithelial (MCF-7)
Transcript factors that have rs12240089[chr1:31977447]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31977437 31977448 EBF1 JASPAR yes 27935609
chr1 31977437 31977449 TFAP2B JASPAR yes 27935610
chr1 31977437 31977449 TFAP2C JASPAR yes 27935611
chr1 31977437 31977450 TFAP2A JASPAR yes 27935612
chr1 31977437 31977450 TFAP2B JASPAR yes 27935613
chr1 31977437 31977450 TFAP2C JASPAR yes 27935614
chr1 31977437 31977451 EBF1 JASPAR yes 27935615
chr1 31977438 31977451 TFAP2A JASPAR yes 27935616
chr1 31977438 31977451 TFAP2B JASPAR yes 27935617
chr1 31977438 31977451 TFAP2C JASPAR yes 27935618
chr1 31977438 31977452 GLIS2 JASPAR yes 27935619
chr1 31977439 31977450 EBF1 JASPAR yes 27935620
chr1 31977444 31977454 SP1 JASPAR yes 27935621
chr1 31977445 31977466 ZNF263 JASPAR yes 27935622
chr1 31977447 31977458 E2F6 JASPAR yes 27935623
Genes associated with rs12240089[chr1:31977447], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More