EnhancerDB
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  3. rs12259890[chr10:30471182]
Enhancers that have rs12259890[chr10:30471182]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 30457845 30482070 enh13108
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
chr10 30471133 30471514 vista6973
VISTA
Transcript factors that have rs12259890[chr10:30471182]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 30471177 30471183 TCF4 TRANSFAC yes 21068851
chr10 30471177 30471183 TCF4 TRANSFAC yes 126384120
chr10 30471177 30471191 E2F7 JASPAR yes 21068852
chr10 30471177 30471191 E2F7 JASPAR yes 126384121
chr10 30471178 30471190 E2F8 JASPAR yes 21068853
chr10 30471178 30471190 E2F8 JASPAR yes 126384122
chr10 30471179 30471190 STAT3 JASPAR yes 21068854
chr10 30471179 30471190 STAT3 JASPAR yes 126384123
chr10 30471180 30471191 CEBPA JASPAR yes 21068855
chr10 30471180 30471191 CEBPA JASPAR yes 126384124
Genes associated with rs12259890[chr10:30471182], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More