EnhancerDB
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  3. rs12260572[chr10:90657781]
Enhancers that have rs12260572[chr10:90657781]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 90652896 90660795 enh1414
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Heart
Transcript factors that have rs12260572[chr10:90657781]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 90657048 90657834 TCF7L2 UCSC Txn Factor no Conserved 107930200
chr10 90657238 90657834 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107930208
chr10 90657774 90657788 RORA JASPAR yes 128971848
Genes associated with rs12260572[chr10:90657781], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More