EnhancerDB
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  3. rs12275628[chr11:129117979]
Enhancers that have rs12275628[chr11:129117979]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 129115125 129124795 enh29264
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Muscle (A673) Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs12275628[chr11:129117979]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 129117967 129117981 PLAG1 JASPAR yes 42360446
chr11 129117974 129117979 SP1 TRANSFAC yes 42360447
chr11 129117975 129117980 SP1 TRANSFAC yes 42360448
chr11 129117975 129117984 THAP1 JASPAR yes 42360449
chr11 129117978 129117982 LFA1 TRANSFAC yes 42360450
Genes associated with rs12275628[chr11:129117979], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More