EnhancerDB
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  3. rs12301909[chr12:46548472]
Enhancers that have rs12301909[chr12:46548472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs12301909[chr12:46548472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46546181 46550702 ZNF274 GTRD no Cervix (HeLa-S3) 21540604
chr12 46546576 46549090 ZNF274 GTRD no Cervix (HeLa-S3) 21540606
chr12 46546764 46549374 P63 GTRD no Skin (Keratinocyte) 21540620
chr12 46546958 46548551 P63 GTRD no Skin (Keratinocyte) 21540629
chr12 46547024 46549379 P63 GTRD no Skin (Keratinocyte) 21540630
chr12 46547086 46548766 ZNF274 GTRD no Cervix (HeLa-S3) 21540632
chr12 46547096 46548556 P63 GTRD no Skin (Keratinocyte) 21540633
chr12 46547363 46548578 ZNF274 GTRD no Cervix (HeLa-S3) 21540641
chr12 46547431 46549147 ZNF274 GTRD no Cervix (HeLa-S3) 21540642
chr12 46547431 46549339 ZNF274 GTRD no Cervix (HeLa-S3) 21540643
chr12 46547492 46549355 ZNF274 GTRD no Cervix (HeLa-S3) 21540644
chr12 46547507 46549282 ZNF274 GTRD no Cervix (HeLa-S3) 21540645
chr12 46547598 46548515 ZBTB33 GTRD no Lung (A549) 21540646
chr12 46547901 46548477 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21540652
chr12 46547911 46548580 ERG GTRD no Prostate (RWPE1) 21540654
chr12 46547939 46548509 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21540655
chr12 46548026 46548496 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21540656
chr12 46548046 46548542 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21540657
chr12 46548445 46549348 ZNF274 GTRD no Cervix (HeLa-S3) 21540661
chr12 46548449 46549010 ZBTB33 GTRD no Brain (SK-N-SH) 21540662
chr12 46548459 46548477 SRF JASPAR yes 120598871
chr12 46548461 46548472 CDX2 JASPAR yes 120598872
chr12 46548461 46548477 SRF JASPAR yes 120598873
chr12 46548461 46548479 SRF JASPAR yes 120598874
chr12 46548462 46548473 HOXA10 JASPAR yes 120598875
chr12 46548462 46548474 SRF JASPAR yes 120598876
chr12 46548463 46548472 CDX1 JASPAR yes 120598877
chr12 46548463 46548473 HOXD13 JASPAR yes 120598878
chr12 46548470 46548475 ETS2 TRANSFAC yes 120598879
Genes associated with rs12301909[chr12:46548472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More