EnhancerDB
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  3. rs12306739[chr12:46549743]
Enhancers that have rs12306739[chr12:46549743]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs12306739[chr12:46549743]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46546181 46550702 ZNF274 GTRD no Cervix (HeLa-S3) 21540604
chr12 46549206 46550411 AR GTRD no Prostate (PC-3) 21540669
chr12 46549242 46550958 ZNF274 GTRD no Cervix (HeLa-S3) 21540670
chr12 46549399 46550814 ZBTB33 GTRD no Lung (A549) 21540671
chr12 46549402 46550594 ZNF274 GTRD no Cervix (HeLa-S3) 21540672
chr12 46549408 46550774 ZBTB33 GTRD no Lung (A549) 21540673
chr12 46549427 46551942 ZNF274 GTRD no Cervix (HeLa-S3) 21540674
chr12 46549443 46550338 ZNF274 GTRD no Cervix (HeLa-S3) 21540675
chr12 46549443 46552644 ZNF274 GTRD no Cervix (HeLa-S3) 21540676
chr12 46549452 46551820 ZNF274 GTRD no Cervix (HeLa-S3) 21540677
chr12 46549466 46550339 TCF7L2 GTRD no Colon (HCT116) 21540678
chr12 46549467 46550906 ZNF274 GTRD no Cervix (HeLa-S3) 21540679
chr12 46549473 46550925 ZNF274 GTRD no Cervix (HeLa-S3) 21540680
chr12 46549499 46550498 ZNF274 GTRD no Cervix (HeLa-S3) 21540681
chr12 46549509 46550450 ZBTB33 GTRD no Brain (SK-N-SH) 21540682
chr12 46549510 46552088 ZBTB33 GTRD no Lung (A549) 21540683
chr12 46549514 46550494 ZBTB33 GTRD no Brain (SK-N-SH) 21540684
chr12 46549515 46550177 ZNF274 GTRD no Cervix (HeLa-S3) 21540685
chr12 46549520 46550449 ZBTB33 GTRD no Brain (SK-N-SH) 21540686
chr12 46549522 46550530 ERG GTRD no Prostate (RWPE1) 21540687
chr12 46549562 46550286 ZBTB33 GTRD no Brain (SK-N-SH) 21540688
chr12 46549577 46550675 ZBTB33 GTRD no Lung (A549) 21540689
chr12 46549578 46550205 ZBTB33 GTRD no Lung (A549) 21540690
chr12 46549582 46550343 ZBTB33 GTRD no Lung (A549) 21540691
chr12 46549586 46550216 TCF7L2 GTRD no Colon (HCT116) 21540692
chr12 46549588 46550373 ZBTB33 GTRD no Brain (SK-N-SH) 21540693
chr12 46549616 46550291 ZBTB33 GTRD no Brain (SK-N-SH) 21540694
chr12 46549619 46550384 ZBTB33 GTRD no Brain (SK-N-SH) 21540695
chr12 46549638 46550318 ZBTB33 GTRD no Lung (A549) 21540696
chr12 46549646 46550118 ZBTB33 GTRD no Brain (SK-N-SH) 21540697
chr12 46549660 46550282 ZNF274 GTRD no Cervix (HeLa-S3) 21540698
chr12 46549673 46550311 ZNF274 GTRD no Cervix (HeLa-S3) 21540699
chr12 46549678 46550205 ZBTB33 GTRD no Brain (SK-N-SH) 21540700
chr12 46549692 46550205 ZBTB33 GTRD no Lung (A549) 21540701
chr12 46549703 46550234 ZNF274 GTRD no Cervix (HeLa-S3) 21540702
chr12 46549730 46549746 POU4F3 JASPAR yes 120599104
chr12 46549732 46549746 POU4F1 JASPAR yes 120599105
chr12 46549732 46549747 HNF1A JASPAR yes 120599106
chr12 46549733 46549746 HNF1B JASPAR yes 120599107
chr12 46549733 46549747 POU4F1 JASPAR yes 120599108
chr12 46549733 46549749 POU4F2 JASPAR yes 120599109
chr12 46549733 46549749 POU4F3 JASPAR yes 120599110
chr12 46549734 46549750 POU4F3 JASPAR yes 120599111
chr12 46549736 46549750 POU4F1 JASPAR yes 120599112
chr12 46549736 46549751 HNF1A JASPAR yes 120599113
chr12 46549737 46549750 HNF1B JASPAR yes 120599114
chr12 46549738 46549748 PAX3 JASPAR yes 120599115
chr12 46549738 46549748 PAX7 JASPAR yes 120599116
chr12 46549738 46549750 HNF1B JASPAR yes 120599117
chr12 46549739 46550182 ZBTB33 GTRD no Brain (SK-N-SH) 21540703
chr12 46549740 46549750 EMX1 JASPAR yes 120599118
chr12 46549740 46549750 EMX2 JASPAR yes 120599119
chr12 46549740 46549750 ESX1 JASPAR yes 120599120
chr12 46549740 46549750 GSX1 JASPAR yes 120599121
chr12 46549740 46549750 GSX2 JASPAR yes 120599122
chr12 46549740 46549750 HESX1 JASPAR yes 120599123
chr12 46549740 46549750 HOXB2 JASPAR yes 120599124
chr12 46549740 46549750 HOXB3 JASPAR yes 120599125
chr12 46549740 46549750 LBX2 JASPAR yes 120599126
chr12 46549740 46549750 LHX2 JASPAR yes 120599127
chr12 46549740 46549750 LHX6 JASPAR yes 120599128
chr12 46549740 46549750 MIXL1 JASPAR yes 120599129
chr12 46549740 46549750 MNX1 JASPAR yes 120599130
chr12 46549740 46549750 NOTO JASPAR yes 120599131
chr12 46549740 46549750 POU6F1 JASPAR yes 120599132
chr12 46549740 46549750 RAX JASPAR yes 120599133
chr12 46549741 46549749 ISX JASPAR yes 120599134
chr12 46549741 46549749 LMX1A JASPAR yes 120599135
chr12 46549741 46549749 LMX1B JASPAR yes 120599136
chr12 46549741 46549749 NKX6-1 JASPAR yes 120599137
chr12 46549741 46549749 NKX6-2 JASPAR yes 120599138
chr12 46549741 46549749 PRRX1 JASPAR yes 120599139
chr12 46549741 46549749 RAX2 JASPAR yes 120599140
chr12 46549741 46549749 SHOX JASPAR yes 120599141
chr12 46549741 46549749 UNCX JASPAR yes 120599142
chr12 46549741 46549749 VAX1 JASPAR yes 120599143
Genes associated with rs12306739[chr12:46549743], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More