EnhancerDB
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  3. rs12309376[chr12:53376796]
Enhancers that have rs12309376[chr12:53376796]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12309376[chr12:53376796]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53376386 53377015 ZNF274 GTRD no Bone Marrow (K562) 21548937
chr12 53376778 53376799 IRF1 JASPAR yes 120970163
chr12 53376782 53376796 SPI1 JASPAR yes 120970164
chr12 53376782 53376796 STAT1 JASPAR yes 120970165
chr12 53376782 53376797 STAT2 JASPAR yes 120970166
Genes associated with rs12309376[chr12:53376796], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 52880958 52887041 - KRT6A ENSG00000205420.6 52887041 489755 Spleen 0.42022 12090