EnhancerDB
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  3. rs12324001[chr15:70059399]
Enhancers that have rs12324001[chr15:70059399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 70045752 70060475 enh16279
Skin (Keratinocyte) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs12324001[chr15:70059399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 70059394 70059399 GATA1 TRANSFAC yes 24377676
chr15 70059397 70059407 ALX3 JASPAR yes 24377677
chr15 70059397 70059407 EN2 JASPAR yes 24377678
chr15 70059397 70059407 ESX1 JASPAR yes 24377679
chr15 70059397 70059407 GBX1 JASPAR yes 24377680
chr15 70059397 70059407 GBX2 JASPAR yes 24377681
chr15 70059397 70059407 GSX1 JASPAR yes 24377682
chr15 70059397 70059407 GSX2 JASPAR yes 24377683
chr15 70059397 70059407 LBX2 JASPAR yes 24377684
chr15 70059397 70059407 MIXL1 JASPAR yes 24377685
chr15 70059398 70059406 BARX1 JASPAR yes 24377686
chr15 70059398 70059406 BSX JASPAR yes 24377687
chr15 70059398 70059406 EN1 JASPAR yes 24377688
chr15 70059398 70059406 ISX JASPAR yes 24377689
chr15 70059398 70059406 LHX9 JASPAR yes 24377690
chr15 70059398 70059406 MSX1 JASPAR yes 24377691
chr15 70059398 70059406 MSX2 JASPAR yes 24377692
chr15 70059398 70059406 PRRX1 JASPAR yes 24377693
chr15 70059398 70059406 RAX2 JASPAR yes 24377694
chr15 70059398 70059406 SHOX JASPAR yes 24377695
chr15 70059399 70059410 PHOX2A JASPAR yes 24377696
Genes associated with rs12324001[chr15:70059399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More