EnhancerDB
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Enhancers that have rs12327352[chr18:56517712]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56508646 56521424 enh17749
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12327352[chr18:56517712]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56517395 56517975 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824418
chr18 56517520 56518190 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824419
chr18 56517535 56517785 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824420
chr18 56517565 56517941 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824421
chr18 56517586 56517930 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824422
chr18 56517587 56517851 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824423
chr18 56517598 56517928 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824424
chr18 56517675 56517779 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824425
chr18 56517706 56517715 RUNX2 JASPAR yes 110983590
chr18 56517706 56517716 RUNX3 JASPAR yes 110983591
chr18 56517712 56517727 JUND JASPAR yes 110983592
Genes associated with rs12327352[chr18:56517712], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More