EnhancerDB
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  3. rs12337739[chr9:117670664]
Enhancers that have rs12337739[chr9:117670664]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 117658987 117675815 enh10925
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Blood (OCI-LY7) Stomach Placenta Breast Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Thymus Epithelial (MCF-7)
chr9 117670443 117671027 vista63113
VISTA
Transcript factors that have rs12337739[chr9:117670664]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 117670270 117670936 TCF12 UCSC Txn Factor no Conserved 108551639
chr9 117670272 117670859 TFAP2A UCSC Txn Factor no Conserved 108551640
chr9 117670278 117670868 TFAP2C UCSC Txn Factor no Conserved 108551641
chr9 117670285 117670842 EP300 UCSC Txn Factor no Conserved 108551642
chr9 117670345 117670841 TCF7L2 UCSC Txn Factor no Conserved 108551643
chr9 117670348 117670760 FOSL2 UCSC Txn Factor no Conserved 108551644
chr9 117670349 117670887 FOXA1 UCSC Txn Factor no Conserved 108551645
chr9 117670354 117670950 GATA3 UCSC Txn Factor no Conserved 108551646
chr9 117670369 117670753 BCL3 UCSC Txn Factor no Conserved 108551647
chr9 117670372 117670746 REST UCSC Txn Factor no Conserved 108551648
chr9 117670403 117670673 FOXA2 UCSC Txn Factor no Conserved 108551649
chr9 117670413 117670677 ZBTB33 UCSC Txn Factor no Conserved 108551650
chr9 117670421 117670683 GABPA UCSC Txn Factor no Conserved 108551651
chr9 117670554 117670795 GATA2 UCSC Txn Factor no Conserved 108551652
chr9 117670654 117670669 SOX21 JASPAR yes 86513958
chr9 117670654 117670669 SOX21 JASPAR yes 95406292
Genes associated with rs12337739[chr9:117670664], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More