EnhancerDB
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  3. rs12355574[chr10:88173544]
Enhancers that have rs12355574[chr10:88173544]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 88167845 88181195 enh1395
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Uterus Thymus Heart
Transcript factors that have rs12355574[chr10:88173544]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 88172800 88173575 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21447541
chr10 88172800 88173575 NFIC UCSC Txn Factor no Conserved 107929256
chr10 88172800 88173575 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107929257
chr10 88172844 88173578 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21447544
chr10 88172844 88173578 RUNX3 UCSC Txn Factor no Conserved 107929261
chr10 88172844 88173578 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107929262
chr10 88173247 88173567 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21447557
chr10 88173271 88173575 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21447561
chr10 88173285 88173549 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21447562
chr10 88173535 88173547 ZBTB7A JASPAR yes 128832799
chr10 88173540 88173545 SP1 TRANSFAC yes 128832801
Genes associated with rs12355574[chr10:88173544], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More