EnhancerDB
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  3. rs12404817[chr1:208004531]
Enhancers that have rs12404817[chr1:208004531]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207976785 208007638 enh901
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12404817[chr1:208004531]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208004530 208004535 SP1 TRANSFAC yes 34880001
chr1 208004531 208004543 TFAP2B JASPAR yes 34880002
chr1 208004531 208004543 TFAP2C JASPAR yes 34880003
Genes associated with rs12404817[chr1:208004531], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More