EnhancerDB
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  3. rs12406229[chr1:203291579]
Enhancers that have rs12406229[chr1:203291579]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203277525 203300170 enh883
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12406229[chr1:203291579]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203285704 203292159 ZNF274 GTRD no Blood (GM12878) 21368276
chr1 203285704 203292159 ZNF274 GTRD no Blood (GM12878) 107858484
chr1 203285725 203292196 ZNF274 GTRD no Blood (GM12878) 21368277
chr1 203285725 203292196 ZNF274 GTRD no Blood (GM12878) 107858485
chr1 203285967 203292656 ZNF274 GTRD no Blood (GM12878) 21368283
chr1 203285967 203292656 ZNF274 GTRD no Blood (GM12878) 107858486
chr1 203286011 203291736 ZNF274 GTRD no Blood (GM12878) 21368289
chr1 203286011 203291736 ZNF274 GTRD no Blood (GM12878) 107858487
chr1 203286069 203291868 STAT3 GTRD no Blood (OCI-LY7) 21368295
chr1 203286069 203291868 STAT3 GTRD no Blood (OCI-LY7) 107858488
chr1 203286095 203292070 ZNF274 GTRD no Blood (GM12878) 21368299
chr1 203286095 203292070 ZNF274 GTRD no Blood (GM12878) 107858489
chr1 203286121 203292024 ZNF274 GTRD no Blood (GM12878) 21368301
chr1 203286121 203292024 ZNF274 GTRD no Blood (GM12878) 107858490
chr1 203286284 203291886 ZNF274 GTRD no Blood (GM12878) 21368311
chr1 203286284 203291886 ZNF274 GTRD no Blood (GM12878) 107858491
chr1 203288179 203291629 ZNF274 GTRD no Blood (GM12878) 21368393
chr1 203288179 203291629 ZNF274 GTRD no Blood (GM12878) 107858492
chr1 203288841 203291904 ZNF274 GTRD no Blood (GM12878) 21368396
chr1 203288841 203291904 ZNF274 GTRD no Blood (GM12878) 107858493
chr1 203288891 203292285 ZNF274 GTRD no Bone Marrow (K562) 21368397
chr1 203288891 203292285 ZNF274 GTRD no Bone Marrow (K562) 107858494
chr1 203288997 203291942 ZNF274 GTRD no Bone Marrow (K562) 21368402
chr1 203288997 203291942 ZNF274 GTRD no Bone Marrow (K562) 107858499
chr1 203289030 203291765 ZNF274 GTRD no Blood (GM12878) 21368406
chr1 203289030 203291765 ZNF274 GTRD no Blood (GM12878) 107858503
chr1 203289030 203292168 ZNF274 GTRD no Bone Marrow (K562) 21368407
chr1 203289030 203292168 ZNF274 GTRD no Bone Marrow (K562) 107858504
chr1 203289070 203292244 ZNF274 GTRD no Bone Marrow (K562) 21368411
chr1 203289070 203292244 ZNF274 GTRD no Bone Marrow (K562) 107858508
chr1 203289129 203291612 ZNF274 GTRD no Blood (GM12878) 21368422
chr1 203289129 203291612 ZNF274 GTRD no Blood (GM12878) 107858519
chr1 203289144 203292167 ZNF274 GTRD no Bone Marrow (K562) 21368424
chr1 203289144 203292167 ZNF274 GTRD no Bone Marrow (K562) 107858521
chr1 203289278 203292081 ZNF274 GTRD no Bone Marrow (K562) 21368446
chr1 203289278 203292081 ZNF274 GTRD no Bone Marrow (K562) 107858542
chr1 203289460 203291968 ZNF274 GTRD no Bone Marrow (K562) 21368486
chr1 203289460 203291968 ZNF274 GTRD no Bone Marrow (K562) 107858582
chr1 203289859 203292643 ZNF274 GTRD no Bone Marrow (K562) 21368511
chr1 203289859 203292643 ZNF274 GTRD no Bone Marrow (K562) 107858601
chr1 203289889 203292522 ZNF274 GTRD no Bone Marrow (K562) 21368512
chr1 203289889 203292522 ZNF274 GTRD no Bone Marrow (K562) 107858602
chr1 203290179 203291924 ZNF274 GTRD no Liver (HepG2) 107858629
chr1 203290190 203291782 ZNF274 GTRD no Liver (HepG2) 107858633
chr1 203290209 203291750 ZNF274 GTRD no Liver (HepG2) 107858639
chr1 203290235 203292625 ZNF143 GTRD no Epithelial (MCF-7) 21368547
chr1 203290235 203292625 ZNF143 GTRD no Epithelial (MCF-7) 107858650
chr1 203290289 203292114 ZNF143 GTRD no Epithelial (MCF-7) 21368553
chr1 203290289 203292114 ZNF143 GTRD no Epithelial (MCF-7) 107858661
chr1 203290611 203292189 ZNF143 GTRD no Epithelial (MCF-7) 21368566
chr1 203290647 203291787 ZNF143 GTRD no Epithelial (MCF-7) 21368567
chr1 203290730 203291642 ZNF274 GTRD no Blood (GM12878) 21368568
chr1 203290742 203292272 ZNF143 GTRD no Epithelial (MCF-7) 21368569
chr1 203290795 203291809 ZNF143 GTRD no Epithelial (MCF-7) 21368570
chr1 203290800 203291817 ZNF143 GTRD no Epithelial (MCF-7) 21368571
chr1 203290806 203291837 ZNF143 GTRD no Epithelial (MCF-7) 21368572
chr1 203290925 203291600 ZNF143 GTRD no Epithelial (MCF-7) 21368573
chr1 203290963 203291812 ZNF274 GTRD no Blood (GM12878) 21368574
chr1 203291021 203292375 ZNF143 GTRD no Epithelial (MCF-7) 21368575
chr1 203291031 203292114 ZNF143 GTRD no Epithelial (MCF-7) 21368576
chr1 203291090 203292139 ZNF143 GTRD no Epithelial (MCF-7) 21368578
chr1 203291116 203291690 ZNF143 GTRD no Epithelial (MCF-7) 21368579
chr1 203291118 203291657 ZNF143 GTRD no Epithelial (MCF-7) 21368580
chr1 203291118 203291869 ZNF274 GTRD no Bone Marrow (K562) 21368581
chr1 203291130 203291624 ZNF274 GTRD no Blood (GM12878) 21368582
chr1 203291165 203291614 ZNF143 GTRD no Epithelial (MCF-7) 21368584
chr1 203291165 203291804 ZNF274 GTRD no Bone Marrow (K562) 21368585
chr1 203291190 203291817 ZNF274 GTRD no Blood (GM12878) 21368586
chr1 203291191 203291704 ZNF274 GTRD no Bone Marrow (K562) 21368587
chr1 203291191 203291886 ZNF274 GTRD no Bone Marrow (K562) 21368588
chr1 203291192 203291609 ZNF143 GTRD no Epithelial (MCF-7) 21368589
chr1 203291194 203292004 ZNF274 GTRD no Bone Marrow (K562) 21368590
chr1 203291196 203292114 ZNF143 GTRD no Epithelial (MCF-7) 21368591
chr1 203291208 203291999 ZNF143 GTRD no Epithelial (MCF-7) 21368592
chr1 203291238 203292142 ZNF274 GTRD no Bone Marrow (K562) 21368593
chr1 203291259 203291674 ZNF274 GTRD no Bone Marrow (K562) 21368595
chr1 203291262 203291732 ZNF274 GTRD no Bone Marrow (K562) 21368596
chr1 203291339 203291836 ZNF274 GTRD no Blood (GM12878) 21368597
chr1 203291346 203291782 ZNF274 GTRD no Bone Marrow (K562) 21368598
chr1 203291404 203291728 ZNF274 GTRD no Bone Marrow (K562) 21368599
chr1 203291568 203291581 SMAD2 JASPAR yes 34617575
Genes associated with rs12406229[chr1:203291579], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More