EnhancerDB
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  3. rs12406976[chr1:2252280]
Enhancers that have rs12406976[chr1:2252280]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2238957 2252675 enh11426
Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Uterus Thymus Heart
Transcript factors that have rs12406976[chr1:2252280]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2252275 2252286 GCM1 JASPAR yes 26236264
chr1 2252277 2252286 THAP1 JASPAR yes 26236265
chr1 2252280 2252284 LFA1 TRANSFAC yes 26236266
Genes associated with rs12406976[chr1:2252280], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More