EnhancerDB
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  3. rs12408116[chr1:12533468]
Enhancers that have rs12408116[chr1:12533468]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12527565 12557135 enh11513
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Blood (T-cell) Liver Astrocyte Lung (PC-9) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Uterus Thymus Heart
chr1 12533412 12533678 vista407
VISTA
Transcript factors that have rs12408116[chr1:12533468]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12532969 12534200 ZNF274 GTRD no Bone Marrow (K562) 107802119
chr1 12533455 12533468 ELF3 JASPAR yes 26823379
chr1 12533455 12533468 ELF3 JASPAR yes 118233101
chr1 12533456 12533468 EHF JASPAR yes 26823390
chr1 12533456 12533468 ELF1 JASPAR yes 26823391
chr1 12533456 12533468 ELF4 JASPAR yes 26823392
chr1 12533456 12533468 EHF JASPAR yes 118233112
chr1 12533456 12533468 ELF1 JASPAR yes 118233113
chr1 12533456 12533468 ELF4 JASPAR yes 118233114
chr1 12533456 12533469 ELF1 JASPAR yes 26823393
chr1 12533456 12533469 ELF1 JASPAR yes 118233115
chr1 12533458 12533468 ELK1 JASPAR yes 26823397
chr1 12533458 12533468 ELK1 JASPAR yes 118233119
Genes associated with rs12408116[chr1:12533468], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More