EnhancerDB
  1. Home
  2. SNP
  3. rs12408665[chr1:52125371]
Enhancers that have rs12408665[chr1:52125371]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52122845 52134475 enh26695
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs12408665[chr1:52125371]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52125350 52125371 IRF1 JASPAR yes 28860294
chr1 52125351 52125372 IRF1 JASPAR yes 28860295
chr1 52125366 52125374 GMEB2 JASPAR yes 28860298
Genes associated with rs12408665[chr1:52125371], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More