EnhancerDB
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  3. rs12408931[chr1:6439774]
Enhancers that have rs12408931[chr1:6439774]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 6411925 6440995 enh26
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach
Transcript factors that have rs12408931[chr1:6439774]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 6439765 6439780 NR2C2 JASPAR yes 26397014
chr1 6439773 6439787 GLIS3 JASPAR yes 26397015
chr1 6439773 6439788 ZIC3 JASPAR yes 26397016
Genes associated with rs12408931[chr1:6439774], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More