EnhancerDB
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  3. rs12409315[chr1:3229258]
Enhancers that have rs12409315[chr1:3229258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12409315[chr1:3229258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3228990 3229910 ZNF274 GTRD no Liver (HepG2) 107801845
chr1 3229243 3229264 IRF1 JASPAR yes 26278276
chr1 3229247 3229261 STAT1 JASPAR yes 26278277
chr1 3229247 3229262 STAT2 JASPAR yes 26278278
chr1 3229248 3229260 IRF1 JASPAR yes 26278279
Genes associated with rs12409315[chr1:3229258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More