EnhancerDB
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  3. rs12409620[chr1:33419242]
Enhancers that have rs12409620[chr1:33419242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33412495 33428675 enh215
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Uterus
Transcript factors that have rs12409620[chr1:33419242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33419232 33419242 ETS1 JASPAR yes 28016708
chr1 33419232 33419243 ETV2 JASPAR yes 28016709
Genes associated with rs12409620[chr1:33419242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More