EnhancerDB
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  3. rs12413938[chr10:30794642]
Enhancers that have rs12413938[chr10:30794642]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 30772685 30803635 enh1155
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr10 30794566 30794715 vista6990
VISTA
Transcript factors that have rs12413938[chr10:30794642]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 30794459 30794843 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21425960
chr10 30794459 30794843 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107906706
chr10 30794486 30794762 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21425961
chr10 30794486 30794762 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107906707
chr10 30794584 30794874 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21425962
chr10 30794584 30794874 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107906708
chr10 30794637 30794647 ELK1 JASPAR yes 21069939
chr10 30794637 30794647 ELK1 JASPAR yes 126406062
chr10 30794638 30794649 ETV2 JASPAR yes 21069940
chr10 30794638 30794649 ETV2 JASPAR yes 126406063
chr10 30794639 30794648 ELK4 JASPAR yes 21069941
chr10 30794639 30794648 ELK4 JASPAR yes 126406064
chr10 30794639 30794649 NFATC3 JASPAR yes 21069942
chr10 30794639 30794649 NFATC3 JASPAR yes 126406065
chr10 30794641 30794647 ETS1 JASPAR yes 21069943
chr10 30794641 30794647 ETS1 JASPAR yes 126406066
Genes associated with rs12413938[chr10:30794642], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More