EnhancerDB
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  3. rs12420594[chr11:66939102]
Enhancers that have rs12420594[chr11:66939102]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 66923765 66944023 enh1845
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12420594[chr11:66939102]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 66939089 66939109 ESR1 JASPAR yes 39408008
chr11 66939091 66939111 PPARG JASPAR yes 39408009
chr11 66939092 66939110 ESR2 JASPAR yes 39408010
chr11 66939093 66939110 ESR1 JASPAR yes 39408012
chr11 66939094 66939109 ESR2 JASPAR yes 39408013
chr11 66939094 66939114 ESR1 JASPAR yes 39408014
chr11 66939102 66939123 IRF1 JASPAR yes 39408016
Genes associated with rs12420594[chr11:66939102], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More