EnhancerDB
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  3. rs12446396[chr16:88261187]
Enhancers that have rs12446396[chr16:88261187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs12446396[chr16:88261187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88260828 88261301 TCF7L2 GTRD no Colon (HCT116) 21735436
chr16 88260861 88261264 TCF7L2 GTRD no Colon (HCT116) 21735437
chr16 88261129 88261749 ZNF274 GTRD no Cervix (HeLa-S3) 21735438
chr16 88261179 88261189 ZNF740 JASPAR yes 12267852
chr16 88261180 88261190 ZNF740 JASPAR yes 12267853
chr16 88261180 88261201 ZNF263 JASPAR yes 12267854
chr16 88261183 88261197 PLAG1 JASPAR yes 12267855
chr16 88261184 88261194 SP1 JASPAR yes 12267856
Genes associated with rs12446396[chr16:88261187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More