EnhancerDB
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  3. rs12446891[chr16:85489953]
Enhancers that have rs12446891[chr16:85489953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85477350 85511195 enh16870
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12446891[chr16:85489953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85488334 85492516 ZNF143 GTRD no Epithelial (MCF-7) 21726100
chr16 85489197 85490806 ZNF143 GTRD no Epithelial (MCF-7) 21726102
chr16 85489221 85490810 ZNF143 GTRD no Epithelial (MCF-7) 21726103
chr16 85489832 85492259 ZNF274 GTRD no Bone Marrow (K562) 21726105
chr16 85489843 85490796 ZNF143 GTRD no Epithelial (MCF-7) 21726106
chr16 85489890 85491954 ZNF274 GTRD no Bone Marrow (K562) 21726107
chr16 85489940 85489953 ELF1 JASPAR yes 12063559
chr16 85489943 85489953 ETV6 JASPAR yes 12063561
chr16 85489943 85489954 FLI1 JASPAR yes 12063562
Genes associated with rs12446891[chr16:85489953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 85204882 85218969 + CTC-786C10.1 ENSG00000262601.1 85204882 270984 Liver 0.141208 15129