EnhancerDB
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  3. rs12452883[chr17:66376754]
Enhancers that have rs12452883[chr17:66376754]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 66370825 66389975 enh17332
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Lung Stomach Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs12452883[chr17:66376754]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 66375767 66377007 ZNF143 GTRD no Epithelial (MCF-7) 21782926
chr17 66375767 66377007 ZNF143 GTRD no Epithelial (MCF-7) 108287255
chr17 66376054 66376993 ZNF143 GTRD no Epithelial (MCF-7) 21782927
chr17 66376054 66376993 ZNF143 GTRD no Epithelial (MCF-7) 108287256
chr17 66376745 66376755 HOXA13 JASPAR yes 55574305
chr17 66376745 66376755 HOXB13 JASPAR yes 55574306
chr17 66376745 66376755 HOXD13 JASPAR yes 55574307
chr17 66376745 66376756 HOXA10 JASPAR yes 55574308
chr17 66376746 66376755 CDX1 JASPAR yes 55574309
chr17 66376746 66376757 CDX2 JASPAR yes 55574310
Genes associated with rs12452883[chr17:66376754], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More