EnhancerDB
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  3. rs12454199[chr18:55906563]
Enhancers that have rs12454199[chr18:55906563]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55895930 55912515 enh17738
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Heart
Transcript factors that have rs12454199[chr18:55906563]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55906553 55906564 EBF1 JASPAR yes 110931365
chr18 55906563 55906573 NKX2-3 JASPAR yes 110931366
Genes associated with rs12454199[chr18:55906563], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More