EnhancerDB
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  3. rs12478052[chr2:232229989]
Enhancers that have rs12478052[chr2:232229989]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232224984 232232485 enh19319
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Astrocyte Muscle (A673) Placenta Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr2 232229850 232230117 vista35150
VISTA
Transcript factors that have rs12478052[chr2:232229989]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232229633 232230547 GATA2 UCSC Txn Factor no Conserved 108435669
chr2 232229796 232230106 BHLHE40 UCSC Txn Factor no Conserved 108435670
chr2 232229820 232230057 USF1 UCSC Txn Factor no Conserved 108435671
Genes associated with rs12478052[chr2:232229989], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More