EnhancerDB
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  3. rs12525328[chr6:25050060]
Enhancers that have rs12525328[chr6:25050060]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25047705 25059655 enh9008
Prostate (PC-3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs12525328[chr6:25050060]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25050053 25050067 TCF7L2 JASPAR yes 100817394
chr6 25050053 25050068 LEF1 JASPAR yes 100817395
chr6 25050056 25050077 IRF1 JASPAR yes 100817396
chr6 25050059 25050073 IRF7 JASPAR yes 100817397
chr6 25050060 25050075 PRDM1 JASPAR yes 100817398
chr6 25050060 25050078 IRF2 JASPAR yes 100817399
Genes associated with rs12525328[chr6:25050060], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More