EnhancerDB
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  3. rs12528538[chr6:17717830]
Enhancers that have rs12528538[chr6:17717830]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17712332 17727615 enh23084
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs12528538[chr6:17717830]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17717822 17717831 HIC2 JASPAR yes 100396393
chr6 17717823 17717839 ZNF143 JASPAR yes 100396394
chr6 17717824 17717834 SP1 JASPAR yes 100396395
chr6 17717824 17717844 ESR1 JASPAR yes 100396396
chr6 17717825 17717845 TP63 JASPAR yes 100396398
Genes associated with rs12528538[chr6:17717830], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More