EnhancerDB
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  3. rs12542820[chr8:126200196]
Enhancers that have rs12542820[chr8:126200196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr8 126198445 126207155 enh41538
Prostate (PC-3) Liver (HepG2) Large Intestine Esophagus Astrocyte Lung (A549) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Stomach Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs12542820[chr8:126200196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr8 126200180 126200200 PPARG JASPAR yes 48171884
chr8 126200181 126200199 ESR2 JASPAR yes 48171885
chr8 126200181 126200201 PPARG JASPAR yes 48171886
chr8 126200182 126200199 ESR1 JASPAR yes 48171887
chr8 126200189 126200200 NFIL3 JASPAR yes 48171889
Genes associated with rs12542820[chr8:126200196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More