EnhancerDB
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  3. rs12562488[chr1:2230766]
Enhancers that have rs12562488[chr1:2230766]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2213745 2234616 enh11425
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
chr1 2230678 2230895 vista68
VISTA
Transcript factors that have rs12562488[chr1:2230766]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2226395 2235066 ZNF274 GTRD no Bone Marrow (K562) 107801819
chr1 2226395 2235066 ZNF274 GTRD no Bone Marrow (K562) 107801820
chr1 2230753 2230768 PRDM1 JASPAR yes 26233583
chr1 2230753 2230768 PRDM1 JASPAR yes 118216363
Genes associated with rs12562488[chr1:2230766], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More