EnhancerDB
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  3. rs12562548[chr1:55325241]
Enhancers that have rs12562548[chr1:55325241]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55319988 55335735 enh370
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Liver Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs12562548[chr1:55325241]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55325230 55325241 ELK4 JASPAR yes 29001757
chr1 55325230 55325241 FLI1 JASPAR yes 29001758
chr1 55325230 55325243 ELF3 JASPAR yes 29001759
chr1 55325231 55325241 ETV6 JASPAR yes 29001760
chr1 55325231 55325241 GABPA JASPAR yes 29001761
chr1 55325231 55325242 ELF5 JASPAR yes 29001762
chr1 55325231 55325243 EHF JASPAR yes 29001763
chr1 55325231 55325243 ELF1 JASPAR yes 29001764
chr1 55325231 55325243 ELF4 JASPAR yes 29001765
chr1 55325231 55325244 ELF1 JASPAR yes 29001766
Genes associated with rs12562548[chr1:55325241], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More