EnhancerDB
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  3. rs12563339[chr1:110371320]
Enhancers that have rs12563339[chr1:110371320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110355145 110372339 enh12127
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Uterus Heart
Transcript factors that have rs12563339[chr1:110371320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110370574 110371370 ZNF274 GTRD no Bone Marrow (K562) 21327891
chr1 110370686 110371330 ZNF274 GTRD no Bone Marrow (K562) 21327893
chr1 110371312 110371322 ID4 JASPAR yes 31444060
chr1 110371312 110371322 TCF4 JASPAR yes 31444061
chr1 110371320 110371340 ESR1 JASPAR yes 31444063
Genes associated with rs12563339[chr1:110371320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More