EnhancerDB
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  3. rs12564594[chr1:182116368]
Enhancers that have rs12564594[chr1:182116368]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182109705 182120799 enh12436
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Kidney Epithelial (MCF-7) Stomach Ovary Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr1 182116340 182116866 vista4125
VISTA
Transcript factors that have rs12564594[chr1:182116368]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182116264 182116568 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107849964
chr1 182116277 182116677 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107849965
chr1 182116288 182116668 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107849966
chr1 182116290 182116554 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107849967
chr1 182116293 182116613 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107849968
chr1 182116298 182116608 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107849969
chr1 182116303 182116593 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107849970
chr1 182116335 182116615 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107849971
chr1 182116340 182116572 RUNX3 UCSC Txn Factor no Conserved 107849972
chr1 182116340 182116572 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107849973
chr1 182116344 182116981 SOX2 GTRD no Neural Stem Cells (H9) 107849974
chr1 182116352 182116716 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107849975
chr1 182116366 182116528 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107849976
chr1 182116368 182116604 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107849977
Genes associated with rs12564594[chr1:182116368], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More