EnhancerDB
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  3. rs12566400[chr1:36628666]
Enhancers that have rs12566400[chr1:36628666]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 36623405 36636370 enh239
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs12566400[chr1:36628666]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 36628646 36628666 RREB1 JASPAR yes 28121995
chr1 36628651 36628672 ZNF263 JASPAR yes 28121996
chr1 36628658 36628679 ZNF263 JASPAR yes 28122000
chr1 36628659 36628666 CEBPA TRANSFAC yes 28122001
chr1 36628660 36628671 E2F6 JASPAR yes 28122002
chr1 36628662 36628683 ZNF263 JASPAR yes 28122003
Genes associated with rs12566400[chr1:36628666], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More